BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032F08SP1|AL429606
(830 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig955 1330 0.0
>3x_Contig955
Length = 4159
Score = 1330 bits (671), Expect = 0.0
Identities = 678/679 (99%), Gaps = 1/679 (0%)
Strand = Plus / Plus
Query: 152 ggatttaggtacaatcacaatatatggcccctcgatacctttaatataccgaagataacc 211
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 ggatttaggta-aatcacaatatatggcccctcgatacctttaatataccgaagataacc 78
Query: 212 taggaacgatattgattgcaacgttttaccaagtcccatttcatcagccaaaatcccaga 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 taggaacgatattgattgcaacgttttaccaagtcccatttcatcagccaaaatcccaga 138
Query: 272 aagcttgctttcatgtagagaaatcaaccaattcagaccgtaaacttgataatctcttaa 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 aagcttgctttcatgtagagaaatcaaccaattcagaccgtaaacttgataatctcttaa 198
Query: 332 tttcccttcctttatgaaactcggtgattgtgtcaaaattgttgtatcctcttctaactc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tttcccttcctttatgaaactcggtgattgtgtcaaaattgttgtatcctcttctaactc 258
Query: 392 aacttcctcatcctccatcaattcagcatcttcttcttgttctgtctttctatagtgcct 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aacttcctcatcctccatcaattcagcatcttcttcttgttctgtctttctatagtgcct 318
Query: 452 tggagccctagcgagatgaccggctggctctttcaacgttccagcaactttgttttcagc 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tggagccctagcgagatgaccggctggctctttcaacgttccagcaactttgttttcagc 378
Query: 512 atctatggtcttcagtaatttttgcatgtttttatcatatttggctctgatcccaataaa 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 atctatggtcttcagtaatttttgcatgtttttatcatatttggctctgatcccaataaa 438
Query: 572 gtgtctgaaaagatcagtaatttgcaaaaggtgcttgaagcgaatataagtgtcttcttt 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gtgtctgaaaagatcagtaatttgcaaaaggtgcttgaagcgaatataagtgtcttcttt 498
Query: 632 attcctttgtttagctattttcggatcaacatcaagtaagaacttagatcttctttcgga 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 attcctttgtttagctattttcggatcaacatcaagtaagaacttagatcttctttcgga 558
Query: 692 ccagtacttctcatcatgttgattattgctaacaggattctccatttttgtagcagattt 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ccagtacttctcatcatgttgattattgctaacaggattctccatttttgtagcagattt 618
Query: 752 ctatgagtatttttagataaaggtggttagtatcttatgcagaggtccgcccaagtgtga 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ctatgagtatttttagataaaggtggttagtatcttatgcagaggtccgcccaagtgtga 678
Query: 812 agttgttatgtgcttctag 830
|||||||||||||||||||
Sbjct: 679 agttgttatgtgcttctag 697
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6633
Number of Sequences: 1807
Number of extensions: 6633
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 830
length of database: 10,358,551
effective HSP length: 16
effective length of query: 814
effective length of database: 10,329,639
effective search space: 8408326146
effective search space used: 8408326146
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)